BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028F06SP1|AL428940
(817 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1365 1617 0.0
>3x_Contig1365
Length = 9349
Score = 1617 bits (815), Expect = 0.0
Identities = 816/817 (99%)
Strand = Plus / Plus
Query: 1 gttggatactctacctccgaataacaacaaatgcttaaaagttgattggaagggttcatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7010 gttggatactctacctccgaataacaacaaatgcttaaaagttgattggaagggttcatc 7069
Query: 61 aatggatttatctcatgatcctttgagaaataaattgcatcctgctgaattagttttagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7070 aatggatttatctcatgatcctttgagaaataaattgcatcctgctgaattagttttagc 7129
Query: 121 tcaaatcttaagattaccttgcgatttatacctggattctaagagaagatttttcattga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7130 tcaaatcttaagattaccttgcgatttatacctggattctaagagaagatttttcattga 7189
Query: 181 aaaggtgcatcgtttaadacaaggtatgccattcaggaggacagatgctcaaaaggcatg 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7190 aaaggtgcatcgtttaaaacaaggtatgccattcaggaggacagatgctcaaaaggcatg 7249
Query: 241 tcgtatcgatgtaaacaaagcctccagactatttgctgcctatgagaaaataggttggtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7250 tcgtatcgatgtaaacaaagcctccagactatttgctgcctatgagaaaataggttggtt 7309
Query: 301 gcaggattctcatttcaagaggtttttgtaacttcttatcactaagctcatctttactgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7310 gcaggattctcatttcaagaggtttttgtaacttcttatcactaagctcatctttactgt 7369
Query: 361 ccctgttatcgactccaggtacaaagactctcacacgatacccaatttttcacagtttct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7370 ccctgttatcgactccaggtacaaagactctcacacgatacccaatttttcacagtttct 7429
Query: 421 aaacaaatcattcatcatcatgtgtccacccacttgtggacttgatttcaggttttctat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7430 aaacaaatcattcatcatcatgtgtccacccacttgtggacttgatttcaggttttctat 7489
Query: 481 ttcaactttttttttcttttcctccttcttctagactgattttaccatttatttgtttcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7490 ttcaactttttttttcttttcctccttcttctagactgattttaccatttatttgtttcc 7549
Query: 541 tattccccgacagtatcattgtattatcatcactcatcattattaatttcgggatatatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7550 tattccccgacagtatcattgtattatcatcactcatcattattaatttcgggatatatt 7609
Query: 601 attctattcgcatcaatcacttcgctaattcttttttcttttacctattaatcaactagg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7610 attctattcgcatcaatcacttcgctaattcttttttcttttacctattaatcaactagg 7669
Query: 661 cggacttttacattgtatttcattttttctcattacattattttattatcctaggcgttc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7670 cggacttttacattgtatttcattttttctcattacattattttattatcctaggcgttc 7729
Query: 721 atcattttcggtactgtatcgactttttatttttttatcatgtttcgactttaattattc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7730 atcattttcggtactgtatcgactttttatttttttatcatgtttcgactttaattattc 7789
Query: 781 ccgttactttttagggtactggcactgtcatttattt 817
|||||||||||||||||||||||||||||||||||||
Sbjct: 7790 ccgttactttttagggtactggcactgtcatttattt 7826
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9307
Number of Sequences: 1807
Number of extensions: 9307
Number of successful extensions: 121
Number of sequences better than 1.0e-20: 1
length of query: 817
length of database: 10,358,551
effective HSP length: 16
effective length of query: 801
effective length of database: 10,329,639
effective search space: 8274040839
effective search space used: 8274040839
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)